"Hard-core" bioinformatics books:
Ewens, W.J. and G.R. Grant. 2001.
Statistical Methods in Bioinformatics: An Introduction.
Springer-Verlag, New York.
Durbin, R., S. Eddy, A. Krogh and G. Mitchison. 1998.
Biological Sequence Analysis: Probabilistic Models of Proteins and Nucleic Acids.
Cambridge University Press, Cambridge.
Setubal, J. and J. Meidanis. 1997.
Introduction to Computational Molecular Biology.
PWS Publishing Company, Boston.
General bioinformatics and genomics books:
Gibson, G. and S. Muse. Coming Dec 2001.
A Primer of Genome Science.
Sinauer Associates, Sunderland, Massachusetts.
Baxevanis, A.D. and D.F. Fancis Ouellette (Eds). 2001.
Bioinformatics: A Practical Guide to the Analysis of Genes and Proteins. 2nd Ed.
Wiley-Interscience, New York.
Gibas, C. and P. Jambeck. 2001.
Developing Bioinformatics Computer Skills.
O'Reilly and Associates, Sebastopol, California.
Misener, S. and S.A. Krawetz (Eds). 2000.
Bioinformatics Methods and Protocols. Volume 132: Methods in Molecular Biology.
Humana Press, Towota, New Jersey.
Cantor, C.R. and C.L. Smith. 1999.
Genomics: The Science and Technology Behind the Human Genome Project.
Wiley-Interscience, New York.
Baxevanis, A.D. and D.F. Fancis Ouellette (Eds). 1998.
Bioinformatics: A Practical Guide to the Analysis of Genes and Proteins.
Wiley-Interscience, New York.
Molecular evolution, population genetics, and systematics books:
Graur, D. and W.-H. Li. 2000.
Fundamentals of Molecular Evolution. Second Edition.
Sinauer Associates, Sunderland, Massachusetts.
Nei, M. and S. Kumar. 2000.
Molecular Evolution and Phylogenetics.
Oxford University Press, Oxford.
Patthy, L. 1999.
Protein Evolution.
Blackwell Science, Oxford.
Page, R.D.M. and E.C. Holmes. 1998.
Molecular Evolution: A Phylogenetic Approach.
Blackwell Science, Oxford.
Hartl, D.L. and A.G. Clark. 1997.
Principles of Population Genetics. Third Edition.
Sinauer Associates, Sunderland, Massachusetts.
Li, W.-H. 1997.
Molecular Evolution.
Sinauer Associates, Sunderland, Massachusetts.
Hillis, D.M., C. Moritz and B.K. Mable (Eds). 1996.
Molecular Systematics. Second Edition.
Sinauer Associates, Sunderland, Massachusetts.
Weir, B.S. 1996.
Genetic Data Analysis II: Methods for Discrete Population Genetic Data.
Sinauer Associates, Sunderland, Massachusetts.